@comment{{http://www.math.cmu.edu/~gautam/sj/blog/20150324-bibtex-reverse.html
RSNA - moawad -
To Be or Not To Be Appendicitis:
As Diagnosed by Deep Learning Algorithms, Radiologists, and Residents
Nikita Consul, Mohab Elmohr, Ayman Gaballah,
David Fuentes, Khaled M. Elsayes
}}
@misc{fuentes05,
author = {{\bf D. Fuentes}},
title = {{An Application of Goal-oriented Error Estimation to Shock Loaded Elastomeric Materials}},
month = {July},
year = {2005},
note = {{National Congress on Computational Mechanics. Austin, Texas, Conference Presentation.}},
url = {mediaDir/USACM_July_05.pdf}
}
@misc{fuentes06,
author = {{\bf D. Fuentes}},
title = {{Development of a Computational Paradigm for Laser Treatment of cancer}},
month = {July},
year = {2006},
note = {{World Congress on Computational Mechanics. Los Angeles, California, Conference Presentation.}},
url = {http://dddas.ices.utexas.edu/publications/WCCM_july_2006.pdf}
}
@misc{fuentes07,
author = {{\bf D. Fuentes}},
title = {{A Data Driven Application System for Laser Treatment of Cancer}},
month = {July},
year = {2007},
note = {{National Congress on Computational Mechanics. San Francisco, California, Conference Presentation.}},
url = {http://dddas.ices.utexas.edu/publications/pres_nccm_july07.pdf}
}
@misc{fuentes10,
author = {{\bf D. Fuentes}},
title = {{Thermal Image Reconstruction of \textit{In Vivo} Nanoparticle Concentrations for
MR-Guided Laser Induced Thermal Therapy Optimization}},
month = {February},
year = {2010},
note = {{NanoEngineering for Medicine and Biology, Houston, Texas, Conference Presentation.}}
}
@misc{fuentes10c,
author = {{\bf D. Fuentes}},
title = {{Real-Time Bioheat Transfer Models for Computer Driven MR guided LITT}},
month = {May},
year = {2010},
note = {{ISMRM, Stockholm, Sweden, E-Poster Presentation.}}
}
@misc{fuentes10d,
author = {{\bf D. Fuentes}},
title = {{MR Temperature Imaging Validation of a Bioheat Transfer Model for 3D Prospective Planning of LITT}},
month = {September},
year = {2010},
note = {{Eighth Interventional MRI Symposium. Leipzig, Germany, Poster Presentation.}}
}
@misc{fuentes10e,
author = {{\bf D. Fuentes}},
title = {{Real-Time Model Assisted MR Temperature Imaging for Monitoring LITT Procedures}},
month = {October},
year = {2010},
note = {{BMES 2010 Annual Meeting. Track: Biomedical Imaging and Optics, Austin, Texas, Oral Presentation.}}
}
@misc{fuentes11a,
author = {{\bf D. Fuentes}},
title = {{High Fidelity Computer Models for Prospective Treatment Planning of Radiofrequency Ablation}},
month = {April},
year = {2011},
note = {{STM 2011 Annual Meeting. New Orleans, Louisiana. Poster Presentation.}}
}
@misc{fuentes11c,
author = {{\bf D. Fuentes}},
title = {{Kalman Filtered MR Temperature Imaging}},
month = {May},
year = {2011},
note = {{ISMRM 2011 Annual Meeting. Track: MR Guided Focused Ultrasound, Thermotherapy \& Thermometry, Montreal, Canada. E-Poster Presentation.}}
}
@misc{fuentes11d,
author = {{\bf D. Fuentes}},
title = {{Prospective Planning of MR guided Laser Induced Thermal Therapy in Brain}},
month = {July},
year = {2011},
note = {{National Congress on Computational Mechanics. Minneapolis, Minnesota. Conference Presentation.}}
}
@misc{fuentes12a,
author = {{\bf D. Fuentes}},
title = {{Kalman Filtered Temperature Imaging for Monitoring MRgLITT procedures}},
month = {April},
year = {2012},
note = {{STM 2012 Annual Meeting. Portland, Oregon}}
}
@misc{fuentes12b,
author = {{\bf D. Fuentes}},
title = {{UQ Based Planning of MR Guided Laser Induced Thermal Therapy in Brain}},
month = {May},
year = {2012},
note = {{SAMSI. UQ Transition Workshop. Research Triangle Park, North Carolina}}
}
@misc{fuentes13a,
author = {{\bf D. Fuentes}},
title = {{Planning of MR-Guided Laser Induced Thermal Therapy Using UQ Methods}},
month = {February},
year = {2013},
note = {{SIAM Computational Science and Engineering. Boston, Massachusetts}}
}
@misc{fuentes13b,
author = {{\bf D. Fuentes}},
title = {{Fast Steady State Solution for Simulating Bioheat Distribution for Image Guided Laser Ablation}},
month = {April},
year = {2013},
note = {{STM 2013 Annual Meeting. Aruba}}
}
@misc{fuentes13c,
author = {{\bf D. Fuentes}},
title = {{The Impact of Uncertainty in Nonlinear Temperature Dependent Constitutive Parameters on Predictive Computer Modeling of MRgLITT Procedures}},
month = {May},
year = {2013},
note = {{ISMRM, Salt Lake City, Utah, E-Poster Presentation.}}
}
@misc{Meshkov13a,
author = {Dmitriy Meshkov and Richard Castillo and Edward Castillo and Min Li and Ngoc Pham and Julianne Pollard and {\bf D.~Fuentes} and Adenike Olanrewaju and Brian Hobbs and Thomas Guerrero},
month = {{June}},
year = {2013},
note = {{Society of Nuclear Medicine and Molecular Imaging, Vancouver BC, Canada.}},
title = {{Pre-Radiotherapy FDG PET Predicts Radiation Pneumonitis in Non-Small Cell Lung Cancer Patients}}
}
@misc{Meshkov13b,
author = {Dmitriy Meshkov and Richard Castillo and Edward Castillo and {\bf D.~Fuentes} and Ngoc Pham and Min Li and Adenike Olanrewaju and Julianne Pollard and Brian Hobbs and Thomas Guerrero.},
note = {{NCI Joint Workshop: Technology for Innovation in Radiation Oncology, Bethesda MD, USA}},
title = {{Clinical Symptoms of Radiation Pneumonitis Correlate with Pulmonary Metabolic Radiation Dose-Response in Lung Cancer Patients}},
month = {{June}},
year = {2013}
}
@misc{MacLellan14a,
author = {C. MacLellan and {\bf D. Fuentes} and F. Maier and W. Stefan and J.~D.~Hazle and R. J. Stafford},
title = {{Real-time multi-parametric thermal therapy monitoring: GPU versus CPU}},
month = {May},
year = {2014},
note = {{ISMRM, Milan, Italy, E-Poster Presentation.}}
}
@misc{Maier14a,
author = {F. Maier and C. MacLellan and K. Hwang and {\bf D. Fuentes} and J.~D.~Hazle and R. J. Stafford},
title = {{A Hybrid T1/T2*/PRF Pulse Sequence with Improved Spectral Resolution}},
month = {May},
year = {2014},
note = {{ISMRM, Milan, Italy, E-Poster Presentation.}}
}
@misc{Fahrenholtz14a,
author = {S. Fahrenholtz and T. Moon and M. Franco and Z. Wang and T. Warburton and {\bf D. Fuentes}},
title = {{A Portable Treatment Planning System for MR-Guided Thermal Therapy}},
month = {May},
year = {2014},
note = {{NSF SBIR/STTR 2014, Phase II Grantee Conference, Baltimore, Maryland}}
}
@misc{Castillo14a,
author = {E. Castillo and R. Castillo and {\bf D. Fuentes} and T. Guerrero},
title = {{A Moving Least Squares Approach for Computing Spatially Accurate Transformations That Satisfy Strict Physiologic Constraints}},
month = {July},
year = {2014},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Austin, Texas.}}
}
@misc{Fuentes14b,
author = {{\bf D. Fuentes} and R. Castillo and E. Castillo and T. Guerrero},
title = {{Morphometry Based Measurements of the Structural Response to Whole Brain Radiation}},
month = {{July}},
year = {2014},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Austin, Texas.}}
}
@misc{Fahrenholtz14b,
author = {S.~Fahrenholtz and R.~J.~Stafford and J.~Hazle and A.~Shetty and {\bf D. Fuentes}},
title = {{Preliminary predictions from an inverse problem-trained model}},
month = {Sept},
year = {2014},
note = {{Image-Guided Therapy workshop, Cambridge, MA, USA}}
}
@misc{Fahrenholtz14c,
author = {S.~Fahrenholtz and R.~J.~Stafford and F.~Maier and A.~Shetty and {\bf D. Fuentes}},
title = {{Inverse problem statistics of optical parameter inference in brain MR-guided laser induced thermal therapy}},
month = {May},
year = {2014},
note = {{STM 2014 Annual Meeting. Minneapolis, Minnesota}}
}
@misc{Maier14b,
author = {F. Maier and C. MacLellan and {\bf D. Fuentes} and E.~N.~K.~Cressman and K.~Hwang and J.~Yung and J.~D.~Hazle and R. J. Stafford},
title = {{MR monitoring of thermochemical ablation injections}},
month = {October},
year = {2014},
note = {{cum laude. Tenth Interventional MRI Symposium. Leipzig, Germany, Poster Presentation.}}
}
@misc{maier15,
title = {{Characterization of Thermochemical Ablation Injections Using 23Na MRI}},
author = {Maier, Florian and Cressman, Erik N. K. and Berger, Moritz and {\bf D.~Fuentes} and Stafford, R. Jason and MacLellan, Christopher J. and Umathum, Reiner and Nagel, Armin M. },
year = {{2015}},
note = {{ISMRM, Toronta, Canada, E-Poster Presentation.}}
}
@misc{bankson15,
title = {{ Model-Based Reconstruction of Hyperpolarized [1-13C]-Pyruvate}},
author = {Bankson, James and Walker, Christopher M. and Stefan, Wolfgang and {\bf D.~Fuentes} and Merritt, Matthew E. and Chen, Yunyun and Malloy, Craig R.and Sherry, A. Dean and Lai, Stephen and Hazle, John },
year = {{2015}},
note = {{ISMRM, Toronta, Canada, Poster Presentation.}}
}
@misc{madankan15,
author = {R. Madankan and {\bf D. Fuentes}},
title = {{Accelerated Model-based Signal Reconstruction for Magnetic Resonance Thermometry Data in Presence of Uncertainties}},
year = {{2015}},
month = {July},
note = {{13th United States National Congress on Computational Mechanics conference, San Diego, California.}}
}
@misc{Fahrenholtz15a,
author = {S. Fahrenholtz and J. Hazle and J. Stafford and A. Shetty and {\bf D. Fuentes}},
title = {{Results of cross validation from a trained model for laser induced thermal therapy}},
year = {{2015}},
note = {{32nd Annual Meeting of the Society for Thermal Medicine}}
}
@misc{kareem15,
author = {K Ahmed and {\bf D. Fuentes} and J D Hazle and A Qayyum and V L Cox and K M Elsayes},
title = {{Three Dimensional Volumetric Image Segmentation of the Liver Tips for Clinical Practice and Future Perspectives}},
note = {Educational Exhibit, Radiological Society of North America. 101th Annual Meeting},
year = {{2015}},
month = {November}
}
@misc{maclellan15b,
author = {C MacLellan and MP Melancon and F Salatan and Y Qiao and K Hwang and {\bf D. Fuentes} and RJ Stafford},
year = {{2015}},
title = {{Magnetic Resonance Based Quantification of Nanoparticle Distribution and Heating in Nanoparticle Mediated Laser Interstitial Thermal Therapy (npLITT).}},
note = {{32nd Annual Meeting of the Society for Thermal Medicine.}}
}
@misc{madankan15b,
author = {R. Madankan and S. Fahrenholtz and J. Hazle and J. Stafford and A. Shetty and {\bf D. Fuentes}},
title = {{Accurate Modeling of Laser Induced Thermal Therapy in Presence of Heterogeneous Tissue}},
year = {{2015}},
note = {{32nd Annual Meeting of the Society for Thermal Medicine}}
}
@misc{lin2016,
author = {JS~Lin and {\bf D~Fuentes} and I~McCutcheon and S~Ferguson and S~Prabhu and J~Weinberg and GN~Fuller and JD~Hazle and D~Schellingerhout},
title = {{Development of a Prediction Technique for Tissue Features using Radiological-Pathological Correlations}},
month = {April},
year = {2016},
note = {{DI Trainee Research Symposium - Poster}}
}
@misc{loupot2016,
author = {S.L.~Thrower and {\bf D~Fuentes} and R. Madankan and W. Stefan and J.D. Hazle},
title = {{A Sparse Approximation Reconstruction Algorithm for Superparamagnetic Relaxometry}},
month = {April},
year = {2016},
note = {{DI Trainee Research Symposium - Poster}}
}
@misc{rsna2016Kareem,
author = {K~Ahmed and {\bf D. Fuentes} and K M Elsayes},
title = {{Three Dimensional Volumetric Image Segmentation of the Liver; Tips for Clinical Practice and Future Perspectives.}},
month = {November},
year = {2016},
note = {Educational Exhibit, Radiological Society of North America. 102th Annual Meeting}
}
@misc{MacLellan16icho,
author = {C~MacLellan and {\bf D~Fuentes} and H~Espinoza and S~Prabhu and G~Rao and J~Weinberg and J~Stafford},
title = {{A Patient Derived Logistic Model of Thermal Dose}},
year = {2016},
note = {{33nd Annual Meeting of the Society for Thermal Medicine, New Orleans}}
}
@misc{Fahrenholtz16icho,
author = {S~Fahrenholtz and R~Madankan and A~Shetty and S~Danish and JD~Hazle and RJ~Stafford and {\bf D~Fuentes} },
title = {{Laser ablation prediction via global optimization and cross-validation}},
year = {2016},
note = {{33nd Annual Meeting of the Society for Thermal Medicine, New Orleans}}
}
@misc{madankan16icho,
author = {R~Madankan and C~MacLellan and S~Fahrenholtz and J~Hazle and RJ~Stafford and {\bf D~Fuentes}},
title = {{Effect of Different Tissue Segmentation schemes on Precise Treatment Planning of Laser Induced Thermal Therapy: A Retrospective Study}},
year = {2016},
note = {{33nd Annual Meeting of the Society for Thermal Medicine, New Orleans}}
}
@misc{carter16rsna,
title = {{
RECIST 1.1 Criteria and Quantitative CT Image Features to Predict Pathologic Response to Immunotherapy in Melanoma: Preliminary Findings
}},
author = {B.~W.~Carter and P.~R.~Bhosale and M.~G.~Elbanan and A.~Duran and S.~Rao and E.~Unlu and J.~Sun and W.~Wei and {\bf D.~Fuentes} and W.~T.Yang },
note = {Radiological Society of North America. 102th Annual Meeting},
month = {November},
year = {2016}
}
@misc{FahrenholtzAAPM16,
title = {{Flexible Training of MR-Guided Laser Ablation Models Via Global Optimization}},
author = {SJ Fahrenholtz and RJ Stafford and R Madankan and JD Hazle and {\bf D Fuentes}},
month = {July},
year = {2016},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Washington, DC}}
}
@misc{MadankanAAPM16,
title = {{Treatment Planning for Laser Ablation Therapy in Presence of Heterogeneous Tissue: A Retrospective Study}},
author = {R Madankan and C MacLellan and S Fahrenholtz and J Weinberg and G Rao and J Hazle and R Stafford and {\bf D Fuentes} },
month = {July},
year = {2016},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Washington, DC}}
}
@misc{LinAAPM16,
title = {{Validation of Image Registration Methods for Brain Magnetic Resonance Imaging}},
author = {J Lin and {\bf D Fuentes} and A Chandler and J Hazle and D Schellingerhout},
month = {July},
year = {2016},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Washington, DC}}
}
@misc{MacLellanAAPM2016,
title = {{Investigation of MRI Derived Thermal Dose Models}},
author = {CJ MacLellan and {\bf D Fuentes} and H Espinoza and S Prabhu and G Rao and J Weinberg and R Stafford},
month = {July},
year = {2016},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Washington, DC}}
}
@misc{LoupotSIAM16,
title = {{Sparse source reconstruction for nanomagnetic relaxometry }},
author = {Loupot, Sara and Stefan, W. and Madankan, R. and Mathieu, K. and {\bf D.~Fuentes} and J.D. Hazle },
month = {May},
year = {2016},
note = {{SIAM Conference on Imaging Science}}
}
@misc{LoupotIWMPI2016,
author = {Loupot, S. and Stefan, W. and Madankan, R. and Mathieu, K. and {\bf D.~Fuentes} and Hazle, J.D. },
title = {{Sparse source reconstruction for nanomagnetic relaxometry}},
year = {2016},
note = {{International Workshop on Magnetic Particle Imaging}}
}
@misc{MitchellSIAM16,
title = {{Stability of Information Theoretic K-Space Trajectories for Model-Based MR Thermal Image Reconstruction}},
author = {Drew Mitchell and Reza Madankan and Samuel Fahrenholtz and Christopher MacLellan and Wolfgang Stefan and Jason Stafford and John Hazle and {\bf D.~Fuentes}},
month = {May},
year = {2016},
note = {{SIAM Conference on Imaging Science}}
}
@misc{MadankanSIAM16,
title = {{Information Theoretic Approach for Accelerated Magnetic Resonance Thermometry in the Presence of Uncertainties abstract}},
author = {Reza Madankan and Wolfgang Stefan and Christopher MacLellan and Samuel Fahrenholtz and Drew Mitchell and R.J. Stafford and John Hazle and {\bf D.~Fuentes}},
month = {May},
year = {2016},
note = {{SIAM Conference on Imaging Science}}
}
@misc{StefanSIAM16,
title = {{Background Signal Suppression for Magnet Resonance (mr) Phase Images abstract}},
author = {Wolfgang Stefan and {\bf D.~Fuentes} and Erol Yeniaras and Ken-Pin Hwang and John D. Hazle and R. Jason Stafford},
month = {May},
year = {2016},
note = {{SIAM Conference on Imaging Science}}
}
@misc{MitchellIMRI16,
title = {{A Heterogeneous Tissue Model for Treatment Planning in Laser Induced Thermal Therapy}},
author = {Drew Mitchell and Samuel Fahrenholtz and Reza Madankan and Christopher MacLellan and Jason Stafford and John Hazle and {\bf D.~Fuentes}},
month = {October},
year = {2016},
note = {{11th Interventional MRI Symposium. Baltimore, Maryland}}
}
@misc{MitchellACES17,
title = {{Stability of Information Theoretic K-Space Trajectories for Model-Based MR Thermal Image Reconstruction abstract}},
author = {Drew Mitchell and Reza Madankan and Samuel Fahrenholtz and Christopher MacLellan and Wolfgang Stefan and Jason Stafford and John Hazle and {\bf D.~Fuentes}},
month = {March},
year = {2017},
note = {{Advances in Computational Sciences and Engineering, A conference in honor of the 80th birthday of Prof. J. Tinsley Oden}}
}
@misc{AvritscherRsna2017,
title = {{Multiparametric imaging correlations with pathology in a HCC rat model}},
author = {{\bf D. Fuentes} and N Munoz and K Maldonado and C Kingsley and K Michel and H Taghavi and R Avritscher},
month = {November},
year = {2017},
note = {Radiological Society of North America. 103th Annual Meeting}
}
@misc{khalafrsna2017,
title = {{Hepatocellular Carcinoma (HCC) Response to Transcatheter Arterial Chemoembolization (TACE) and Its Correlation with HCC Tumor Volumes}},
author = {Ahmed M. Khalaf and {\bf D.~Fuentes} and Ahmed O. Kaseb and Manal Hassan and Ali Morshid and John D. Hazle and Khaled M. Elsayes},
month = {November},
year = {2017},
note = {Radiological Society of North America. 103th Annual Meeting}
}
@misc{khalafahpba2018,
title = {{Quantitative CT Imaging Features Correlate with Colorectal Cancer Liver Metastases (CLM) Mutational Status}},
author = {Ahmed M. Khalaf and Ali Morshid and {\bf D.~Fuentes} and Veronica Cox and John D. Hazle and Khaled M. Elsayes and Aliya Qayyum},
year = {2018},
note = {{AHPBA meeting}}
}
@article{bastosneuroonc2017,
author = {Bastos, Dhiego Chaves De Almeida and Rao, Ganesh and Weinberg, Jeffrey S and {\bf D.~Fuentes} and Stafford, Jason and Prabhu, Sujit S},
title = {SURG-27. PREDICTORS OF LOCAL CONTROL OF POST SRS BRAIN METASTASIS TREATED WITH LITT},
journal = {Neuro-Oncology},
volume = {19},
number = {6},
pages = {vi241},
year = {2017}
}
@misc{khalaf2018arrs,
title = {{Quantifying HCC response to TACE using existing criteria and fully automated volumetric segmentation}},
author = {Ahmed M. Khalaf and {\bf D.~Fuentes} and Aliya Qayyum and Janio Szklaruk and Ali Morshid and Ahmed Kaseb and Manal Hassan and John D. Hazle and Khaled M. Elsayes},
month = {April},
year = {2018},
note = {{American Roentogen Ray Society (ARRS) Annual Meeting}}
}
@misc{khalaf2018arrsB,
title = {{Role of Radiomic Texture Analysis Mapping in Prediction of Microvascular Invasion in Hepatocellular Carcinoma}},
author = {Ahmed M. Khalaf and Ali Morshid and {\bf D.~Fuentes} and Asif Rashid and Ahmed Kaseb and Manal Hassan and Veronica Cox and John D. Hazle and Khaled M. Elsayes and Aliya Qayyum},
month = {April},
year = {2018},
note = {{American Roentogen Ray Society (ARRS) Annual Meeting}}
}
@misc{khalaf2018arrsC,
title = {{Decoding of The Patatin-Like Phospholipase Domain Containing 3 (PNPLA3) Gene Phenotype Using Noninvasive Imaging Quantitative Radiomics Approach}},
author = {Ahmed M. Khalaf and {\bf D.~Fuentes} and Ali Morshid and John D. Hazle and Manal Hassan and Khaled M. Elsayes },
month = {April},
year = {2018},
note = {{American Roentogen Ray Society (ARRS) Annual Meeting}}
}
@misc{sovizi2017binary,
title = {Binary classification of superparamagnetic relaxometry data for cancer screening},
author = {Sovizi, Javad and Thrower, Sara L and {\bf D.~Fuentes} and Stefan, Wolfgang and Hazle, John D and Mathieu, Kelsey},
year = {2017},
publisher = {AACR}
}
@misc{thrower2017volumetric,
title = {Volumetric reconstruction of targeted nanoparticles for superparamagnetic relaxometry},
author = {Thrower, Sara L and Mathieu, Kelsey and Stefan, Wolfgang and Aburto, R Romero and Lu, Zhen and Bast, Robert C and Sovizi, Javad and {\bf D.~Fuentes} and Hazle, John D},
year = {2017},
publisher = {AACR}
}
@misc{khalaf17rsna,
title = {{Hepatocellular Carcinoma (HCC) Response to Transcatheter Arterial Chemoembolization (TACE) and Its Correlation with HCC Tumor Volumes}},
author = { A.M.~Khalaf and {\bf D.~Fuentes} and A.~Kaseb and M.~Hassal and A.~Morshid and JD~Hazle and K.M.~Elsayes },
month = {November},
year = {2017},
note = {Radiological Society of North America. 103th Annual Meeting}
}
@article{khalaf2017quantitative,
title = {Quantitative CT imaging features for hepatocellular carcinoma (HCC) with b-catenin (CTNNB1) gene mutation.},
author = {Khalaf, Ahmed M and {\bf D.~Fuentes} and Ahmed, Kareem and Abdel-Wahab, Reham and Hassan, Manal and Kaseb, Ahmed Omar and Hazle, John D and Elsayes, Khaled M},
year = {2017},
journal = {Journal of Clinical Oncology},
number = {4},
volume = {35},
pages = {253},
note = {{poster presentation}},
publisher = {American Society of Clinical Oncology (ASCO)}
}
@misc{thrower2017siam,
title = {{3D Reconstruction of cancer-bound nanoparticles using superparamagnetic relaxometry}},
author = {S.L. Thrower and J. Sovizi and W. Stefan and K. Mathieu and J.D. Hazle and {\bf D. Fuentes}},
month = {October},
year = {2017},
note = {{SIAM Houston Imaging Sciences Symposium}}
}
@misc{loupot2017aapm,
title = {{A 3D Reconstruction Algorithm for Superparamagnetic Relaxometry}},
author = {S. Loupot and {\bf D. Fuentes} and W. Stefan and J. Sovizi and K. Mathieu and J.D. Hazle },
month = {July},
year = {2017},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Denver, Colorado.}}
}
@misc{DCE17a,
title = {{MRgLITT Induced Perfusion Changes Assessed by DCE-MRI}},
author = {{{\bf D. Fuentes}, D. Bastos, V. Beechar, D. Mitchell, C. MacLellan, G. Rao, J. Stafford, S. Prabhu}},
month = {Feb},
year = {2017},
note = {{Intraoperative Imaging Society, Hannover, Germany}}
}
@misc{bastos17a,
title = {{Predictors of Local Control of Post SRS Brain Metastasis Treated with LITT. 6th Biennial Meeting of the Intraoperative Imaging Society}},
author = {D. Bastos and V. Beechar and G.~Rao and {\bf D. Fuentes} and J. Stafford and J. Weinberg and S. Prabhu},
month = {Feb},
year = {2017},
note = {{Intraoperative Imaging Society, Hannover, Germany}}
}
@misc{mitchellstm2017,
title = {{A Heterogeneous Tissue Model for Treatment Planning in Laser Induced Thermal Therapy. }},
author = {Drew Mitchell and Samuel Fahrenholtz and Christopher MacLellan and Jason Stafford and John Hazle and {\bf D.~Fuentes}},
month = {April},
year = {2017},
note = {{Society for Thermal Medicine, Poster Presentation}}
}
@misc{mitchellusnccm2017,
title = {{A Heterogeneous Tissue Model for Treatment Planning in Laser Induced Thermal Therapy. }},
author = {Drew Mitchell and Samuel Fahrenholtz and Christopher MacLellan and Jason Stafford and John Hazle and {\bf D.~Fuentes}},
month = {May},
year = {2017},
note = {{14th U.S. National Congress on Computational Mechanics}}
}
@article{marcus2018quantitative,
title = {Quantitative CT imaging features correlate with colorectal cancer liver metastases (CLM) mutational status},
author = {Marcus, RM and {\bf D.~Fuentes} and Lillemoe, HA and Qayyum, A and Aloia, TA},
month = {March},
year = {2018},
note = {AHPBA Annual Meeting, Miami, Fl}
}
@misc{mitchellditrainee2018,
title = {{Improved Synthetic MRI Reproducibility through Mutual Information Optimization of Acquisition Parameters}},
author = {Drew Mitchell and Ken-Pin Hwang and Tao Zhang and Linda Chi and Jason Stafford and {\bf D.~Fuentes}},
month = {May},
year = {2018},
note = {{DI Trainee Research Symposium, Poster Presentation }}
}
@misc{mitchellismrm2018,
title = {{Information Theory Quantification of Acquisition Parameter Impact on Synthetic MRI Reconstruction Uncertainty}},
author = {Drew Mitchell and Ken-Pin Hwang and Tao Zhang and {\bf D.~Fuentes}},
month = {June},
year = {2018},
note = {{ISMRM, Paris, France, E-Poster Presentation}}
}
@misc{fuentessiam2018,
title = {{Therapy Response Prediction in Liver}},
author = {{\bf D.~Fuentes}},
month = {July},
year = {2018},
note = {{SIAM Annual Meeting. Portland, Oregon}}
}
@misc{throweraapm2018,
title = {{Comparison of two reconstruction methods for bound-nanoparticle detection using superparamagnetic relaxometry}},
author = {S.L. Thrower and S. Kandala and {\bf D. Fuentes} and K. Mathieu and W. Stefan and A. Kulp and J. D. Hazle},
month = {July},
year = {2018},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Nashville, Tennessee}}
}
@misc{gatesasnr2018,
title = {{Radiological-Pathological Correlations and Imaging Signatures for Gliomas}},
author = {Lin, J. and Gates, E. and Weinberg, J. and Hamilton, J. and Prabhu, S. and Hazle, J. and Fuller, G. and Baladandayuthapani, V. and {\bf D. Fuentes} and Schellingerhout, D. },
year = {2018},
note = {{56th Annual Meeting of the American Society of Neuroradiology}}
}
@misc{gatesaapm2018,
title = {{Quantitative Prediction of Cellular Proliferation Marker Ki67 Using MR Imaging in Glioma}},
author = {E Gates and J Lin and J Weinberg and J Hamilton and S Prabhu and J Hazle and G Fuller and V Baladandayuthapani and {\bf D Fuentes} and D Schellingerhout},
month = {July},
year = {2018},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Nashville, Tennessee}}
}
@misc{owensaapm2018,
title = {{Convolutional Neural Networks for Fully Automatic Segmentation of Lung Tumors in CT Images}},
author = {C Owens and C Peterson and C Tang and E Koay and W Yu and J Li and M Salehpour and {\bf D Fuentes} and L Court and J Yang},
month = {July},
year = {2018},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Nashville, Tennessee}}
}
@misc{pauloskitacc2018,
title = {{Optimizing Deep Learning Methods for Image Segmentation with Distributed Training}},
author = {J. Gregory Pauloski and Zhao Zhang and William J. Allen and John D. Hazle and {\bf D.~Fuentes}},
month = {October},
year = {2018},
note = {{2018 TACC Symposium for Texas Researchers (TACCSTER), Austin, Texas}}
}
@misc{oedicprit2018,
title = {{Mathematical Model Development for Thermochemical Ablation}},
author = {S Oedi and M Spors and {\bf D Fuentes} and ENK Cressman},
month = {August},
year = {2018},
note = {{CPRIT Program Trainee Data, MD Anderson, Houston, Texas}}
}
@misc{kandalawmic2018,
title = {{Deep learning based classification method for automatic detection of bad trials in magnetic relaxometry}},
author = {S. Kandala and S.L. Thrower and K. Mathieu and W. Stefan and J. D. Hazle and {\bf D. Fuentes}},
month = {October},
year = {2018},
note = {{World Molecular Imaging Congress (WMIC) 2018, Annual Meeting, Seattle, WA}}
}
@misc{lima18AACR,
title = {{Development and calibration of patient-specific tumor growth model for predicting the response of hepatocellular carcinoma}},
author = {E.~A.~B.~F.~Lima and {\bf D.~Fuentes} and A.~I.~Morshid and N. M. Rylander and J.~T.~Oden and T.~E.~Yankeelov},
month = {October},
year = {2018},
note = {30th Anniversary AACR Special Conference Convergence: Artificial Intelligence, Big Data, and Prediction in Cancer}
}
@misc{actor18Keck,
title = {{Liver Segmentation via Unrolled Mumford-Shah Network}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {October},
year = {2018},
note = {Keck Annual Research Conference, Gulf Coast Consortia, Houston, TX}
}
@misc{morshid18rsna,
title = {{Machine Learning Models for Prediction of Hepatocellular Carcinoma Response to Transcatheter Arterial Chemoembolization}},
author = { A.~Morshid and A.M.~Khalaf and J.~Yu A.~Kaseb and M.~Hassal and and {\bf D.~Fuentes} and K.M.~Elsayes },
month = {November},
year = {2018},
note = {Radiological Society of North America. 104th Annual Meeting}
}
@misc{actor19OilGas,
title = {{A Comparison of Image Segmentation Methods}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {March},
year = {2019},
note = {Rice Oil and Gas High Performance Computing Conference, Houston, TX}
}
@misc{gatesiois19,
title = {{Estimated Maps of Proliferative Activity Present Alternative Targets For Initial Glioma Biopsy}},
author = {{E.Gates, J. Lin, J. Weinberg, J. Hamilton, S. Prabhu, J. Hazle, G. Fuller, V. Baladandayuthapani, {\bf D. Fuentes}, and D. Schellingerhout}},
month = {March},
year = {2019},
note = {{Intraoperative Imaging Society, Houston, Tx}}
}
@misc{GatesAMIA2020,
title = {{Combination of MRI Sequences Predicts Cellular Density in Glioma.}},
author = {Gates, E. and Weinberg, J. and Lin, S. and Prabhu, S. and Hamilton, J and Hazle, J. D. and Fuller, G. N. and Baladandayuthapani, V. and {\bf D. Fuentes} and Schellingerhout, D.},
month = {March},
year = {2020},
note = {{American Medical Informatics Association Summit, Houston, Tx}}
}
@misc{gatesMLUQ19,
title = {{Validation of Gaussian Process Uncertainty Estimates in Registration of MRI Datasets}},
author = {Gates, E. and Schellingerhout, D and {\bf D. Fuentes}},
month = {July},
year = {2019},
note = {{Second Workshop for Research Challenges and Opportunities at the Interface of Machine Learning and Uncertainty Quantification, Los Angeles, CA}}
}
@misc{gatesnlm2019,
title = {{Guiding the First Biopsy in Glioma Patients Using Estimated Ki-67 Maps Derived from MRI}},
author = {Gates, E. D. H. and Lin, J. S. and Weinberg, J. S. and {\bf D. Fuentes} and Schellingerhout, D.},
month = {June},
year = {2019},
note = {{National Library of Medicine Training Conference, Indianapolis IN}}
}
@misc{fuentes19a,
author = {{\bf D. Fuentes}},
title = {{Mathematical model developments for thermoembolization}},
month = {May},
year = {2019},
note = {{STM 2019 Annual Meeting. St. Pete Beach, Florida}}
}
@misc{gatessiam19,
title = {{Combination of Multicontrast MRI Estimates Local Glioma Malignancy}},
author = {{E. Gates, {\bf D. Fuentes}, and D. Schellingerhout}},
month = {November},
year = {2019},
note = {{Second Annual Meeting, SIAM TX-LA Section, November 1-3, 2019 Southern Methodist University, Dallas, TX, USA }}
}
@misc{elbanan20,
title = {{Convolutional Neural Networks for Medical Image Analysis, What the Future Radiologist Needs to Know}},
author = {Elbanan, Mohamedi and Elsayes, Khaled and {\bf D. Fuentes} and Elfatairy, Kareem and Moawad, Ahmed and Kaye, Adam},
note = {{American Roentogen Ray Society (ARRS) Annual Meeting}},
month = {May},
year = {2020}
}
@misc{baqri19,
author = {M.~Baqri and S.~Kandala and {\bf D. Fuentes}},
note = {{Applied Nanotechnology and Nanoscience International Conference}},
month = {November},
year = {2019},
title = {{A preprocessing filter to improve superparamagnetic iron oxide nanoparticle (SPION) – based early tumor detection}}
}
@misc{Liu2020,
title = {Myeloperoxidase-produced HOCl is a paracrine effector linking myeloid cells to NF-κB signaling in melanoma, mediating anti-tumor responses during early melanoma progression},
author = {Tracy Liu and S.~Gammon and {\bf D. Fuentes} and David Piwnica-Worms},
year = {2020},
publisher = {AACR Annual Meeting, San Diego, CA}
}
@misc{moawad2020a,
title = {{Artificial intelligence Primer for Beginners; Definitions, Applications and Simple Explanations in Abdominal imaging}},
author = {Moawad, Ahmed and {\bf D. Fuentes} and Elbanan, Mohamed and Blair, Katie and Elsayes, Khaled},
month = {March},
year = {2020},
note = {{SAR Annual Scientific Meeting}}
}
@misc{mohabsar2020A,
author = {Elmohr, Mohab and {\bf D. Fuentes} and Blair, Katie and Elbanan, Mohamed and Tawfik, Aya and Elsayes, Khaled},
title = {{Radiomics and the Adrenal Gland: An Overview}},
month = {March},
year = {2020},
note = {{SAR Annual Scientific Meeting}}
}
@misc{mohabsar2020B,
author = {Elmohr, Mohab and {\bf D. Fuentes} and Blair, Katie and Moawad, Ahmed and Hazle, Jhn and Elsayes, Khaled},
title = {{Liver Imaging in the Era of Artificial Intelligence: Current Indications and Future Prespective}},
month = {March},
year = {2020},
note = {{SAR Annual Scientific Meeting}}
}
@misc{mitchellusnccm2019,
title = {{Conditional Mutual Information to Quantify Information Content of Sequential Synthetic MRI Acquisitions}},
author = {Drew Mitchell and Ken Hwang and Jason Stafford and James Bankson and {\bf D.~Fuentes}},
month = {July},
year = {2019},
note = {{15th U.S. National Congress on Computational Mechanics}}
}
@misc{mitchellismrm2019,
title = {{Information Quantification of Subsequent Acquisitions for Minimizing Synthetic MRI Reconstruction Uncertainty}},
author = {Drew Mitchell and {\bf D.~Fuentes} and Jason Stafford and James Bankson and Ken-Pin Hwang},
month = {May},
year = {2019},
note = {{ISMRM, Montreal, Canada, E-Poster Presentation}}
}
@misc{hwangismrm2019,
title = {{Effects of acquisition and compressed sensing reconstruction parameters on 3D-QALAS multi-parameter quantitation and synthetic imaging of the brain}},
author = {Ken-Pin Hwang and Marcel Warntjes and Naoyuki Takei and Suchandrima Banerjee and Drew Mitchell and R. Stafford and Linda Chi and {\bf D.~Fuentes}},
month = {May},
year = {2019},
note = {{ISMRM, Montreal, Canada, E-Poster Presentation}}
}
@misc{rsna2019Qayyum,
author = {Aliya Qayyum and Sidra J. Tayyab and {\bf D. Fuentes}and Rebecca K. Marcus and A. R. Klekers and Rizwan Aslam and Jia Sun and Thomas A. Aloia},
title = {{Radiomics and Enhancement Ratio in Colorectal Cancer (CRC) Liver Metastases: Determination of Mutational Status}},
month = {November},
year = {2019},
note = {Educational Exhibit, Radiological Society of North America. 105th Annual Meeting}
}
@misc{rsna2019elmohr,
author = {Mohab Elmohr and {\bf D. Fuentes} and Sarah M. Palmquist and Ahmed Moawad and John D. Hazle and Khaled M. Elsayes},
title = {{Artificial Intelligence and Liver Segmentation: Current Applications and Future Directions}},
month = {November},
year = {2019},
note = {Educational Exhibit, Radiological Society of North America. 105th Annual Meeting}
}
@misc{gap2019elmohr,
author = {Elmohr, M.M. and {\bf D.~Fuentes} and Habra, M.A. and Bhosale, P.R. and Qayyum, A.A. and Gates, E. and Morshid, A.I. and Moawad, A.W. and Hazle, J.D. and Elsayes, K.M. },
title = {{Machine learning-based texture analysis for differentiation of large adrenal cortical tumors on CT}},
month = {April},
year = {2019},
note = {{The annual Global Academic Programs (GAP) Conference 2019; Houston, TX}}
}
@misc{rsna2019moawada,
author = {Ahmed Moawad and {\bf D. Fuentes} and Mohamed Elbanan and Brett W. Carter and Naveen Garg and Gaiane M. Rauch and David J. Vining and Khaled M. Elsayes},
title = {{Artificial Intelligence in Diagnostic Imaging: Current Applications and Future Perspective}},
month = {November},
year = {2019},
note = {Educational Exhibit, Radiological Society of North America. 105th Annual Meeting}
}
@misc{rsna2019moawadb,
author = {Ahmed Moawad and {\bf D. Fuentes} and Mohamed Elbanan and Katherine J. Blair and Layla Shere and Kundan A. Rao and Khaled M. Elsayes },
title = {{Artificial Intelligence Primer for Beginners: Definitions, Applications, and Simple Explanations in Radiology, Cum Laude}},
month = {November},
year = {2019},
note = {Educational Exhibit, Radiological Society of North America. 105th Annual Meeting}
}
@misc{rsna2019mohab,
author = {Mohab Elmohr and {\bf D. Fuentes} and Katherine J. Blair and Mohamed Elbanan and Ayahallah Ahmed and Khaled M. Elsayes },
title = {{Adrenal Imaging in the Era of Radiomics: Current Indications and Future Perspective}},
month = {November},
year = {2019},
note = {Educational Exhibit, Radiological Society of North America. 105th Annual Meeting}
}
@misc{actordatascience2019,
title = {{Identification of Kernels in a Convolutional Neural Network: Connections Between Level Set Equation and Deep Learning for Image Segmentation.}},
author = {Jonas A. Actor and {\bf D. Fuentes} and Beatrice Riviere},
month = {October},
year = {2019},
note = {Ken Kennedy Institute Rice Data Science Conference}
}
@misc{actorkeck2019,
title = {{Kernel Analysis of a Neural Network for Liver Segmentation.}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {November},
year = {2019},
note = {29th Annual Keck Center Research Conference : Precision Environmental Health}
}
@misc{emma2019,
title = {{Opening the Black Box of a Convolutional Neural Network Used for Brain Tumor Segmentation.}},
author = {McCollum, E. and Jonas A. Actor and Gates, E and {\bf D. Fuentes}},
month = {August},
year = {2019},
note = {CPRIT CURE Summer Undergraduate Research Program}
}
@misc{actorgolub2019,
title = {{A Comparison of Image Segmentation Methods.}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {July},
year = {2019},
note = {SIAM Gene Golub Student Summer School}
}
@misc{actor19AMIA,
title = {{Efficient and Robust CT Image Segmentation with a Level Set Network}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {November},
year = {2019},
note = {AMIA Annual Symposium, Washington, D.C.}
}
@misc{bastos17AANS,
title = {{Predictors of local control of post-stereotactic radiosurgery brain lesions treated with laser interstitial thermal ablation}},
author = {Bastos, Dhiego and Beechar, Vivek and Rao, Ganesh and {\bf D.~Fuentes} and Stafford, Jason and Weinberg, Jeffrey and Prabhu, Sujit Siqueira},
month = {April},
year = {2017},
note = {AANS Annual Meeting, Los Angeles, CA}
}
@misc{fuentes17AANS,
title = {{DCE-MRI assessment of MRgLITT Response}},
author = {{\bf D.~Fuentes} and Bastos, Dhiego and Rao, Ganesh and Weinberg, Jeffrey and Prabhu, Sujit Siqueira and Stafford, Jason},
month = {April},
year = {2017},
note = {AANS Annual Meeting, Los Angeles, CA}
}
@misc{traylor19AANS,
title = {{Area under the time-to-Signal intensity curve from dynamic contrast-enhanced magnetic resonance imaging correlates with time-to-progression in patients with brain metastases receiving laser interstitial thermal therapy}},
author = {JI~Traylor and E~Gates and {\bf D. Fuentes} and SS Prabhu and G Rao},
month = {April},
year = {2019},
note = {AANS Annual Meeting, San Diego, CA}
}
@misc{baqriaacr2020,
title = {{A preprocessing filter to improve superparamagnetic iron oxide nanoparticle (SPION) – based early tumor detection}},
author = {M.~Baqri and S.~Kandala and {\bf D. Fuentes}},
month = {March},
year = {2020},
publisher = {AACR Annual Meeting, San Diego, CA}
}
@misc{Huang2020,
author = {K Huang and P Das and L Zhang and M Amirmazaheri and C Nguyen and D Rhee and T Netherton and S Beddar and T Briere and {\bf D Fuentes} and E Holliday and L Court and C Cardenas},
title = {{Incorporating GTV Information in a Multi-Stage Process to Improve Automatically Generated Field Apertures for Rectal Cancer Radiotherapy}},
month = {July},
year = {2020},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Virtual}}
}
@misc{gatesaapm2020,
author = {Gates, E. and Suki, D. and Weinberg, J. and Prabhu, S. and {\bf D. Fuentes} and Schellingerhout, D. },
title = {{Prognostic Value of Imaging-Based Estimates of Glioma Pathology Pre- and Post-Surgery}},
month = {July},
year = {2020},
note = {{American Association of Physicists in Medicine (AAPM): Annual Meeting, Virtual}}
}
@misc{actor20Keck,
title = {{Stabilized Image Segmentation in the Presence of Noise}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {October},
year = {2020},
note = {30th Annual Keck Center Research Conference: A Science Odyssey (2020). Poster Talk}
}
@misc{gates20Keck,
title = {{Automated Cerebrospinal Fluid ROI Selection on Brain Magnetic Resonance Images}},
author = {E. Gates and A. Celaya and D. Schellingerhout and {\bf D. Fuentes}},
month = {October},
year = {2020},
note = {30th Annual Keck Center Research Conference: A Science Odyssey (2020). Poster Talk}
}
@misc{gates2020amia,
author = {Gates, E. and Weinberg, J. and Lin, J. and Prabhu, S. and {\bf D. Fuentes} and Schellingerhout, D. },
title = {{Combination of MRI Sequences Predicts Cellular Density in Glioma.}},
month = {March},
year = {2020},
note = {American Medical Informatics Association Virtual Summit, Houston, TX}
}
@misc{gatesnlm2020a,
author = {Gates, E. and Suki, D. and Weinberg, J. and Prabhu, S. and {\bf D. Fuentes} and Schellingerhout, D. },
title = {{Prognostic Value of Imaging-Based Estimates of Glioma Pathology Pre- and Post-Surgery}},
month = {June},
year = {2020},
note = {NLM national trainee conference, virtual. Plenary Talk}
}
@misc{gateskeck2020b,
author = {Gates, E. and Suki, D. and Weinberg, J. and Prabhu, S. and {\bf D. Fuentes} and Schellingerhout, D. },
title = {{Predicting Local Brain Tumor Pathology to Inform Prognosis and Improve Surgery}},
month = {October},
year = {2020},
note = {30th Annual Keck Center Research Conference: A Science Odyssey (2020). Plenary Talk}
}
@misc{actor20OilGas,
title = {{Stabilizing Deep Convolutional Neural Networks for Image Segmentation.}},
author = {Jonas A. Actor and Beatrice Riviere and {\bf D. Fuentes}},
month = {March},
year = {2020},
note = {In Ken Kennedy Institute Rice Oil and Gas High Performance Computing Conference 2020 (2020). Poster.}
}
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